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dc.contributor.authorŞensoy, Özge
dc.date.accessioned2020-08-14T07:43:21Z
dc.date.available2020-08-14T07:43:21Z
dc.date.issued2020en_US
dc.identifier.citationŞensoy, Ö. (2020). The single nucleotide beta-arrestin2 variant, A248T, resembles dynamical properties of activated arrestin. Turkish Journal of Chemistry, 44(2), 409-420. https://dx.doi.org/10.3906/kim-1910-46en_US
dc.identifier.issn1300-0527
dc.identifier.urihttps://dx.doi.org/10.3906/kim-1910-46
dc.identifier.urihttps://hdl.handle.net/20.500.12511/5736
dc.description.abstractbeta-arrestins are responsible for termination of G protein-coupled receptor (GPCR)-mediated signaling. Association of single nucleotide variants with onset of crucial diseases has made this protein family hot targets in the field of GPCR-mediated pharmacology. However, impact of these mutations on function of these variants has remained elusive. In this study, structural and dynamical properties of one of beta-arrestin2 (arrestin 3) variants, A248T, which has been identified in some cancer tissue samples, were investigated via molecular dynamics simulations. The results showed that the variant underwent structural rearrangements which are seen in crystal structures of active arrestin. Specifically, the "short helix" unravels and the "gate loop" swings forward as seen in crystal structures of receptor-bound and GPCR phosphopeptide-bound arrestin. Moreover, the "finger loop" samples upward position in the variant. Importantly, these regions harbor crucial residues that are involved in receptor binding interfaces. Cumulatively, these local structural rearrangements help the variant adopt active-like domain angle without perturbing the "polar core". Considering that phosphorylation of the receptor is required for activation of arrestin, A248T might serve as a model system to understand phosphorylation-independent activation mechanism, thus enabling modulation of function of arrestin variants which are activated independent of receptor phosphorylation as seen in cancer.en_US
dc.language.isoengen_US
dc.publisherTUBITAK Scientific & Technical Research Council Turkeyen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.rightsAttribution 4.0 International*
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/*
dc.subjectArrestinen_US
dc.subjectG Protein-Coupled Receptoren_US
dc.subjectPhosphorylation-Independent Activationen_US
dc.subjectCanceren_US
dc.subjectSingle Nucleotide Polymorphismen_US
dc.subjectMolecular Dynamics Simulationen_US
dc.titleThe single nucleotide beta-arrestin2 variant, A248T, resembles dynamical properties of activated arrestinen_US
dc.typearticleen_US
dc.relation.ispartofTurkish Journal of Chemistryen_US
dc.departmentİstanbul Medipol Üniversitesi, Mühendislik ve Doğa Bilimleri Fakültesi, Bilgisayar Mühendisliği Bölümüen_US
dc.authorid0000-0001-5950-3436en_US
dc.identifier.volume44en_US
dc.identifier.issue2en_US
dc.identifier.startpage409en_US
dc.identifier.endpage420en_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.identifier.doi10.3906/kim-1910-46en_US
dc.identifier.wosqualityQ4en_US
dc.identifier.scopusqualityQ3en_US


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