Kurum Yazarı "Çakır, Aslı" PubMed İndeksli Yayınlar Koleksiyonu İçin Listeleme
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Artificial intelligence for diagnosis and Gleason grading of prostate cancer: The PANDA challenge
Bulten, Wouter; Kartasalo, Kimmo; Chen, Po-Hsuan Cameron; Ström, Peter; Pinckaers, Hans; Nagpal, Kunal; Cai, Yuannan; Steiner, David F.; van Boven, Hester; Vink, Robert; Hulsbergen-van de Kaa, Christina; van der Laak, Jeroen; Amin, Mahul B.; Evans, Andrew J.; van der Kwast, Theodorus; Allan, Robert; Humphrey, Peter A.; Grönberg, Henrik; Samaratunga, Hemamali; Delahunt, Brett; Tsuzuki, Toyonori; Häkkinen, Tomi; Egevad, Lars; Demkin, Maggie; Dane, Sohier; Tan, Fraser; Valkonen, Masi; Corrado, Greg S.; Peng, Lily; Mermel, Craig H.; Ruusuvuori, Pekka; Litjens, Geert; Eklund, Martin; Brilhante, Américo; Çakır, Aslı; Farré, Xavier; Geronatsiou, Katerina; Molinié, Vincent; Pereira, Guilherme; Roy, Paromita; Saile, Günter; Salles, Paulo G. O.; Schaafsma, Ewout; Tschui, Joëlle; Billoch-Lima, Jorge; Pereira, Emíio M.; Zhou, Ming; He, Shujun; Song, Sejun; Sun, Qing; Yoshihara, Hiroshi; Yamaguchi, Taiki; Ono, Kosaku; Shen, Tao; Ji, Jianyi; Roussel, Arnaud; Zhou, Kairong; Chai, Tianrui; Weng, Nina; Grechka, Dmitry (Nature Research, 2022)Through a community-driven competition, the PANDA challenge provides a curated diverse dataset and a catalog of models for prostate cancer pathology, and represents a blueprint for evaluating AI algorithms in digital ... -
Chordoid meningioma: Report of 5 cases and review of the literature
Tahta, Alican; Genç, Berkhan; Çakır, Aslı; Şekerci, Zeki (Taylor & Francis Ltd, 2023)Chordoid meningioma is a rare, more aggressive subtype of meningioma. This study documents the histological, radiological and clinical features of seven tumours in five patients among 131 meningioma patients who were treated ... -
The IL-25/ILC2 axis promotes lung cancer with a concomitant accumulation of immune-suppressive cells in tumors in humans and mice
Bahhar, İlham; Eş, Zeynep; Köse, Oğuzhan; Turna, Akif; Günlüoğlu, Mehmet Zeki; Çakır, Aslı; Duralı, Deniz; Magnusson, Fay C. (Frontiers Media SA, 2023)Background: Group 2 innate lymphoid cells (ILC2) can be activated by interleukin (IL)-33 or IL-25. IL-25-activated ILC2 cells help protect the host against helminth infection while exacerbating allergic-like inflammation ... -
Intramedullary schwannoma of cervicomedullary junction: A case report
Tahta, Alican; Çetinkal, Ahmet; Çakır, Aslı; Şekerci, Zeki (Elsevier Masson s.r.l., 2022)Background: Intramedullary schwannomas of brain stem and spinal cord are extremely rare. In almost all cases, homogeneous, asymmetrical or circular intensive gadolinium enhancement has been demonstrated. However, no cases ... -
New generation oral anticoagulant apixaban enhances embryo implantation by increasing integrin beta 3 expression in rats: A pilot study
Yıldırım Köpük, Şule; Özer, Nida; Çekmez, Yasemin; Çakır, Aslı; Gürkan, Kıran (Sociedade Brasileira Reproducao Assistida-Sbra, 2022)Objective: The first aim of this study was to investigate the effect of apixaban on endometrial receptivity via immunohistochemical investigation of integrin beta 3 expression in pregnant rats. The second aim was to compare ... -
New generation oral anticoagulant apixaban enhances embryo implantation by increasing integrin β3 expression in rats: A pilot study
Yıldırım Köpük, Şule; Özer, Nida; Çekmez, Yasemin; Çakır, Aslı; Gürkan, Kıran (SBRA - Associação Brasileira de Reprodução Assistida (Brazilian Society of Assisted Reproduction), 2022)Objective: The first aim of this study was to investigate the effect of apixaban on endometrial receptivity via immunohistochemical investigation of integrin β3 expression in pregnant rats. The second aim was to compare ... -
Newly onset cytopenias not always indicate a relapsing AML after allogeneic HSCT, a case of non-destructive post transplant lymphoproliferative disorder
Yiğit Kaya, Süreyya; Aşkın, Abdullah Emre; Bektaş, Şebnem; Çakır, Aslı; Gökmen Sevindik, Ömür (Elsevier Ltd, 2023)Allogeneic hematopoietic stem cell transplantation (allo-HSCT) remains an effective option for the treatment of intermediate and high-risk Acute myeloid leukemia (AML). Post-transplant lymphoproliferative disorder (PTLD) ... -
Pretreatment platelet-to-lymphocyte ratio and neutrophil-to-lymphocyte ratio as a predictor of pathological complete response to neoadjuvant chemotherapy in patients with breast cancer: Single center experience from Turkey
Açıkgöz, Özgür; Yıldız, Anıl; Bilici, Ahmet; Ölmez, Ömer Fatih; Basım, Pelin; Çakır, Aslı (Lippincott Williams and Wilkins, 2022)The aim of this study was to investigate the predictive value of PLR and NLR as an indicator of pathological complete response (pCR) in patients with breast cancer after NACT. One hundred thirty-nine patients with early ... -
Prognostic implications of response to neoadjuvant chemotherapy in breast cancer subtypes
Yıldız, Anıl; Bilici, Ahmet; Açıkgöz, Özgür; Hamdard, Jamshid; Basım, Pelin; Çakır, Tansel; Çakır, Aslı; Ölmez, Ömer Fatih; Gezen, Cem; Yıldız, Özcan (Taylor and Francis Ltd., 2024)The current study was designed to assess the response to treatment, as well as clinical and survival outcomes, across different breast cancer subtypes in patients who underwent neoadjuvant chemotherapy (NAC). From 2014 to ... -
Prognostic significance of HER2 loss after HER2-targeted neoadjuvant treatment in patients with HER2-positive locally advanced breast cancer
Kutlu, Yasin; Çekin, Ruhper; Göktaş Aydın, Sabin; Shbair, Abdallah T. M.; Bilici, Ahmet; Arıcı, Serdar; Öven, Bala Başak; Açıkgöz, Özgür; Özcan, Erkan; Ölmez, Ömer Fatih; Çakır, Aslı; Şeker, Mesut (2024)Loss of human epidermal growth factor receptor 2 (HER2) expression can be seen in almost 25–30 % patients after HER2 receptor directed neoadjuvant treatment. These patients have unclear clinical outcomes in previous studies. ... -
Relationship between the change in tumour-infiltrating lymphocyte level and residual tumour after neoadjuvant chemotherapy in patients with locally advanced breast cancer
Erol, Vedat Buğra; Göktaş Aydın, Sabin; Bilici, Ahmet; Çakır, Aslı; Açıkgöz, Özgür; Ölmez, Ömer Fatih; Basım, Pelin (Taylor and Francis Ltd., 2023)To evaluate the tumour-infiltrating lymphocyte (TIL) rates in breast tissue before and after neoadjuvant chemotherapy (NAC) and their impact on survival, eighty-four patients with locally advanced breast cancer (LABC) were ... -
The role of 18F-FDG PET/CT in predicting the neoadjuvant treatment response in patients with locally advanced breast cancer
Göktaş Aydın, Sabin; Bilici, Ahmet; Ölmez, Ömer Fatih; Öven, Bala Başak; Açıkgöz, Özgür; Çakır, Tansel; Basım, Pelin; Çakır, Aslı; Kutlu, Yasin; Hamdard, Jamshid (Karger, 2022)Purpose: Patients with locally advanced breast cancer (LABC) should be treated with neoadjuvant chemotherapy (NAC). Pathological complete response (pCR) is related to better disease-free survival (DFS). The best strategy ... -
Should core needle lymph node biopsy be a relevant alternative to surgical excisional biopsy in diagnostic work up of lymphomas?
Mutlu, Yaşa Gül; Balık Aydın, Berrin; Çakır, Aslı; Canöz, Özlem; Erol, Cengiz; Sevindik, Ömür Gökmen (AVES, 2023)Objective: Surgical excisional biopsy is accepted as the standard of care approach in the diagnosis of lymphomas. Financial issues related to the increased cost and the invasive nature of the procedure forced physicians ... -
Spinal melorheostosis: A rare presentation
Serttaş, Muhammed Fatih; Sağlam, Fevzi; Kochai, Alauddin; Çakır, Aslı; Kantarcı, Fatih; Dervişoğlu, Sergülen (NLM (Medline), 2023)CASE: A 22-year-old female patient was referred to the orthopaedic department for further examination after a radiopaque area was observed in the T6 vertebra in her chest radiograph. Computed Tomography (CT) showed a ...